Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CVM N17EC1228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1328414 bp
Thymine Count
1313561 bp
Guanine Count
1338976 bp
Cytosine Count
1354881 bp
Genome Length
5346416 bp
Protein-coding Genes
4828 genes
Non-Coding Genes
457 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional chitinase/lysozyme | D9J11_25140 | Not Available | Negative | 5040506 - 5043199 | 97062.3 |
| elongation factor tu | D9J11_25145 | Not Available | Negative | 5043491 - 5043721 | 8379.32 |
| duf4376 domain-containing protein | D9J11_25155 | Not Available | Positive | 5044288 - 5044881 | 22129.7 |
| cytochrome b561 | D9J11_25160 | Not Available | Negative | 5045851 - 5046381 | 20338.4 |
| metal-binding protein zint | D9J11_25165 | Not Available | Negative | 5046724 - 5047374 | 24763.1 |
| sulfoxide reductase heme-binding subunit yedz | D9J11_25170 | Not Available | Negative | 5047631 - 5048266 | 24069.6 |
| mononuclear molybdenum enzyme yedy | D9J11_25175 | Not Available | Negative | 5048267 - 5049271 | 37414.9 |
| 5-hydroxyisourate hydrolase | D9J11_25180 | Not Available | Negative | 5049380 - 5049793 | 15460.4 |
| dna-binding response regulator hprr | D9J11_25185 | Not Available | Positive | 5049926 - 5050597 | 25010.2 |
| hamp domain-containing protein | D9J11_25190 | Not Available | Positive | 5050597 - 5051955 | 50852.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





