Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CVM N17EC1228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1328414 bp
Thymine Count
1313561 bp
Guanine Count
1338976 bp
Cytosine Count
1354881 bp
Genome Length
5346416 bp
Protein-coding Genes
4828 genes
Non-Coding Genes
457 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D9J11_25040 | Not Available | Positive | 5027023 - 5027238 | 8282.85 |
| duf2345 domain-containing protein | D9J11_25045 | Not Available | Positive | 5027252 - 5027605 | 12573.5 |
| hypothetical protein | D9J11_25050 | Not Available | Positive | 5027710 - 5027889 | 7165.14 |
| type vi secretion system baseplate subunit tsse | D9J11_25055 | Not Available | Positive | 5027933 - 5028388 | 17200.7 |
| hypothetical protein | D9J11_25060 | Not Available | Positive | 5028453 - 5028758 | 12069.6 |
| hypothetical protein | D9J11_25065 | Not Available | Positive | 5028813 - 5030177 | 51503.6 |
| hypothetical protein | D9J11_25070 | Not Available | Positive | 5030191 - 5030811 | 23650.0 |
| hypothetical protein | D9J11_25075 | Not Available | Positive | 5031340 - 5031675 | 12598.0 |
| type ii secretion system protein gspe | D9J11_25080 | Not Available | Positive | 5031685 - 5033166 | 54613.9 |
| type ii secretion system protein gspf | D9J11_25085 | Not Available | Positive | 5033163 - 5034359 | 44384.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





