Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CVM N17EC1228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1328414 bp
Thymine Count
1313561 bp
Guanine Count
1338976 bp
Cytosine Count
1354881 bp
Genome Length
5346416 bp
Protein-coding Genes
4828 genes
Non-Coding Genes
457 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D9J11_24435 | Not Available | Negative | 4926696 - 4927085 | 14731.9 |
| integrase | D9J11_24445 | Not Available | Negative | 4928211 - 4928808 | 22641.2 |
| Trna-gly | Not Available | Not Available | Positive | 4928987 - 4929061 | Not Available |
| Trna-thr | Not Available | Not Available | Positive | 4929065 - 4929140 | Not Available |
| site-specific dna-methyltransferase | D9J11_24460 | Not Available | Negative | 4929309 - 4930355 | 40045.6 |
| trmb family transcriptional regulator | D9J11_24465 | Not Available | Negative | 4930506 - 4930703 | 7441.02 |
| duf1133 family protein | D9J11_24470 | Not Available | Negative | 4930929 - 4931483 | 21157.2 |
| rusa family crossover junction endodeoxyribonuclease | D9J11_24475 | Not Available | Negative | 4931492 - 4931851 | 13742.8 |
| duf968 domain-containing protein | D9J11_24480 | Not Available | Negative | 4931864 - 4932913 | 39174.0 |
| hypothetical protein | D9J11_24485 | Not Available | Negative | 4932915 - 4933193 | 11331.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





