Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CVM N17EC1228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1328414 bp
Thymine Count
1313561 bp
Guanine Count
1338976 bp
Cytosine Count
1354881 bp
Genome Length
5346416 bp
Protein-coding Genes
4828 genes
Non-Coding Genes
457 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensor domain-containing diguanylate cyclase | D9J11_23975 | Not Available | Negative | 4833828 - 4834718 | 33895.5 |
| ydei family stress tolerance ob fold protein | D9J11_23980 | Not Available | Negative | 4834973 - 4835365 | 14134.9 |
| 2-oxo-tetronate isomerase | D9J11_23985 | Not Available | Positive | 4835641 - 4836159 | 18321.8 |
| peptidyl-dipeptidase dcp | D9J11_23990 | Not Available | Negative | 4836203 - 4838248 | 77426.7 |
| restriction endonuclease subunit s | D9J11_24060 | Not Available | Positive | 4853298 - 4853963 | 26033.2 |
| hsdr family type i site-specific deoxyribonuclease | D9J11_24065 | Not Available | Positive | 4854085 - 4857201 | 120190.0 |
| hypothetical protein | D9J11_24185 | Not Available | Negative | 4873274 - 4873644 | 13334.7 |
| type 1 fimbrial protein | D9J11_24200 | Not Available | Positive | 4875488 - 4876018 | 18949.6 |
| type 1 fimbrial protein | D9J11_24205 | Not Available | Positive | 4876031 - 4876534 | 18145.5 |
| fimbrial protein | D9J11_24210 | Not Available | Positive | 4876593 - 4877507 | 32071.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





