Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CVM N17EC1228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1328414 bp
Thymine Count
1313561 bp
Guanine Count
1338976 bp
Cytosine Count
1354881 bp
Genome Length
5346416 bp
Protein-coding Genes
4828 genes
Non-Coding Genes
457 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sirb family protein | D9J11_23680 | Not Available | Positive | 4784145 - 4784537 | 14659.7 |
| protein sirb1 | D9J11_23685 | Not Available | Positive | 4784541 - 4785350 | 30843.1 |
| 3-deoxy-8-phosphooctulonate synthase | D9J11_23690 | Not Available | Positive | 4785386 - 4786240 | 30834.5 |
| small toxic polypeptide ldra/ldrc | D9J11_23695 | Not Available | Negative | 4786389 - 4786496 | 3971.95 |
| transposase | D9J11_23705 | Not Available | Positive | 4786684 - 4787106 | 15406.5 |
| benzoate transporter bene | D9J11_23710 | Not Available | Negative | 4787146 - 4788360 | 42034.7 |
| xre family transcriptional regulator | D9J11_23715 | Not Available | Positive | 4788413 - 4788949 | 19686.3 |
| collagenase-like protease | D9J11_23720 | Not Available | Positive | 4789022 - 4790983 | 72750.0 |
| duf2554 family protein | D9J11_23725 | Not Available | Negative | 4791075 - 4791305 | 8709.32 |
| type ii toxin-antitoxin system hicb family antitoxin | D9J11_23735 | Not Available | Positive | 4791727 - 4792143 | 15246.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





