Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CVM N17EC1228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1328414 bp
Thymine Count
1313561 bp
Guanine Count
1338976 bp
Cytosine Count
1354881 bp
Genome Length
5346416 bp
Protein-coding Genes
4828 genes
Non-Coding Genes
457 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D9J11_23530 | Not Available | Positive | 4753505 - 4753810 | 11308.8 |
| protein flxa | D9J11_23535 | Not Available | Positive | 4754013 - 4754345 | 12208.4 |
| isncy family transposase | D9J11_23540 | Not Available | Negative | 4754782 - 4756122 | 51822.9 |
| duf977 family protein | D9J11_23545 | Not Available | Negative | 4756156 - 4756575 | 15960.4 |
| hypothetical protein | D9J11_23550 | Not Available | Negative | 4756616 - 4757581 | 36997.1 |
| hypothetical protein | D9J11_23555 | Not Available | Negative | 4757562 - 4758083 | 19909.8 |
| division inhibition gene dicb repressor | D9J11_23560 | Not Available | Negative | 4758067 - 4758297 | 8578.22 |
| helix-turn-helix domain-containing protein | D9J11_23565 | Not Available | Positive | 4758381 - 4758788 | 15687.9 |
| duf1391 domain-containing protein | D9J11_23570 | Not Available | Positive | 4758955 - 4759110 | 5792.67 |
| hypothetical protein | D9J11_23575 | Not Available | Positive | 4759112 - 4759687 | 22323.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





