Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CVM N17EC1228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1328414 bp
Thymine Count
1313561 bp
Guanine Count
1338976 bp
Cytosine Count
1354881 bp
Genome Length
5346416 bp
Protein-coding Genes
4828 genes
Non-Coding Genes
457 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleotide exchange factor grpe | D9J11_23075 | Not Available | Negative | 4681198 - 4681791 | 21813.1 |
| molecular chaperone grpe | D9J11_23080 | Not Available | Negative | 4681788 - 4681982 | 7103.64 |
| nad(+) kinase | D9J11_23085 | Not Available | Positive | 4681914 - 4682792 | 32568.3 |
| dna repair protein recn | D9J11_23090 | Not Available | Positive | 4682878 - 4684539 | 61400.1 |
| outer membrane protein assembly factor bame | D9J11_23095 | Not Available | Positive | 4684688 - 4685029 | 12362.8 |
| rnfh family protein | D9J11_23100 | Not Available | Negative | 4685091 - 4685381 | 10790.0 |
| ubiquinone-binding protein | D9J11_23105 | Not Available | Negative | 4685371 - 4685847 | 17727.7 |
| ssra-binding protein smpb | D9J11_23110 | Not Available | Positive | 4685979 - 4686461 | 18286.1 |
| Tmrna,resume consensus sequence (at 83): aatagtcgcaaacgacga | Not Available | Not Available | Positive | 4686676 - 4687038 | Not Available |
| duf4376 domain-containing protein | D9J11_23120 | Not Available | Negative | 4687237 - 4687538 | 11385.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





