Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CVM N17EC1228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1328414 bp
Thymine Count
1313561 bp
Guanine Count
1338976 bp
Cytosine Count
1354881 bp
Genome Length
5346416 bp
Protein-coding Genes
4828 genes
Non-Coding Genes
457 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| antirestriction protein | D9J11_22665 | Not Available | Positive | 4610323 - 4610808 | 18120.2 |
| dna repair protein radc | D9J11_22670 | Not Available | Positive | 4610823 - 4611299 | 17631.3 |
| duf987 domain-containing protein | D9J11_22675 | Not Available | Positive | 4611368 - 4611589 | 8379.21 |
| type iv toxin-antitoxin system yeeu family antitoxin | D9J11_22685 | Not Available | Positive | 4612307 - 4612675 | 13748.2 |
| toxin | D9J11_22690 | Not Available | Positive | 4612765 - 4613142 | 14253.1 |
| hypothetical protein | D9J11_22695 | Not Available | Positive | 4613139 - 4613627 | 18111.6 |
| duf957 domain-containing protein | D9J11_22700 | Not Available | Positive | 4613647 - 4613844 | 7510.81 |
| duf4942 domain-containing protein | D9J11_22705 | Not Available | Positive | 4613929 - 4614771 | 32506.1 |
| cytoplasmic protein | D9J11_22710 | Not Available | Positive | 4615039 - 4615185 | 5444.61 |
| sugar efflux transporter | D9J11_22715 | Not Available | Positive | 4615567 - 4616751 | 43382.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





