Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CVM N17EC1228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1328414 bp
Thymine Count
1313561 bp
Guanine Count
1338976 bp
Cytosine Count
1354881 bp
Genome Length
5346416 bp
Protein-coding Genes
4828 genes
Non-Coding Genes
457 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i-e crispr-associated protein cse2/casb | D9J11_22510 | Not Available | Positive | 4582720 - 4583202 | 18696.6 |
| type i-e crispr-associated protein cas7/cse4/casc | D9J11_22515 | Not Available | Positive | 4583215 - 4584306 | 40071.7 |
| type i-e crispr-associated protein cas5/casd | D9J11_22520 | Not Available | Positive | 4584309 - 4584983 | 25219.3 |
| type i-e crispr-associated protein cas6/cse3/case | D9J11_22525 | Not Available | Positive | 4584970 - 4585569 | 22363.4 |
| subtype i-e crispr-associated endonuclease cas1 | D9J11_22530 | Not Available | Positive | 4585585 - 4586502 | 33152.3 |
| type i-e crispr-associated endoribonuclease cas2 | D9J11_22535 | Not Available | Positive | 4586504 - 4586788 | 10518.9 |
| aminopeptidase | D9J11_22540 | Not Available | Negative | 4587187 - 4588224 | 37887.3 |
| sulfate adenylyltransferase subunit 2 | D9J11_22545 | Not Available | Positive | 4588476 - 4589384 | 35190.3 |
| sulfate adenylyltransferase | D9J11_22550 | Not Available | Positive | 4589386 - 4590813 | 52561.5 |
| adenylyl-sulfate kinase | D9J11_22555 | Not Available | Positive | 4590813 - 4591418 | 22322.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





