Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CVM N17EC1228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1328414 bp
Thymine Count
1313561 bp
Guanine Count
1338976 bp
Cytosine Count
1354881 bp
Genome Length
5346416 bp
Protein-coding Genes
4828 genes
Non-Coding Genes
457 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionyl-trna formyltransferase | D9J11_22455 | Not Available | Negative | 4574159 - 4575106 | 34184.5 |
| peptide deformylase | D9J11_22460 | Not Available | Negative | 4575121 - 4575630 | 19373.6 |
| dna-protecting protein dpra | D9J11_22465 | Not Available | Positive | 4575760 - 4576884 | 40997.3 |
| duf494 domain-containing protein | D9J11_22470 | Not Available | Positive | 4576856 - 4577329 | 18497.2 |
| hypothetical protein | D9J11_22475 | Not Available | Positive | 4577358 - 4577900 | 19845.9 |
| l-threonylcarbamoyladenylate synthase type 1 tsac | D9J11_22480 | Not Available | Positive | 4577905 - 4578477 | 20641.7 |
| shikimate dehydrogenase | D9J11_22485 | Not Available | Positive | 4578482 - 4579300 | 29481.4 |
| duf1488 domain-containing protein | D9J11_22490 | Not Available | Positive | 4579297 - 4579554 | 10007.5 |
| gamma carbonic anhydrase family protein | D9J11_22495 | Not Available | Negative | 4579530 - 4580084 | 20246.3 |
| type i-e crispr-associated protein cse1/casa | D9J11_22505 | Not Available | Positive | 4581219 - 4582727 | 55834.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





