Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CVM N17EC1228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1328414 bp
Thymine Count
1313561 bp
Guanine Count
1338976 bp
Cytosine Count
1354881 bp
Genome Length
5346416 bp
Protein-coding Genes
4828 genes
Non-Coding Genes
457 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein translocase subunit sece | D9J11_22255 | Not Available | Negative | 4550488 - 4550871 | 13644.3 |
| elongation factor tu | D9J11_22260 | Not Available | Negative | 4551101 - 4551331 | 8409.34 |
| type ii secretion system protein gspd | D9J11_22265 | Not Available | Negative | 4551332 - 4552943 | 57921.0 |
| type ii secretion system protein gspc | D9J11_22270 | Not Available | Negative | 4552927 - 4553742 | 30039.9 |
| general secretion pathway protein gspa | D9J11_22275 | Not Available | Positive | 4553922 - 4555391 | 55301.1 |
| general secretion pathway protein gspb | D9J11_22280 | Not Available | Positive | 4555393 - 4555812 | 15876.8 |
| 30s ribosomal protein s10 | D9J11_22285 | Not Available | Positive | 4556050 - 4556361 | 11736.3 |
| 50s ribosomal protein l3 | D9J11_22290 | Not Available | Positive | 4556394 - 4557023 | 22244.8 |
| 50s ribosomal protein l4 | D9J11_22295 | Not Available | Positive | 4557034 - 4557639 | 22087.8 |
| 50s ribosomal protein l23 | D9J11_22300 | Not Available | Positive | 4557636 - 4557938 | 11185.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





