Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CVM N17EC1228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1328414 bp
Thymine Count
1313561 bp
Guanine Count
1338976 bp
Cytosine Count
1354881 bp
Genome Length
5346416 bp
Protein-coding Genes
4828 genes
Non-Coding Genes
457 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytoplasmic protein | D9J11_21980 | Not Available | Negative | 4491427 - 4492185 | 28409.1 |
| deor family transcriptional regulator | D9J11_21985 | Not Available | Negative | 4492199 - 4493413 | 43699.9 |
| adenosylcobinamide kinase/adenosylcobinamide phosphate guanyltransferase | D9J11_22005 | Not Available | Positive | 4495464 - 4496009 | 20165.2 |
| adenosylcobinamide-gdp ribazoletransferase | D9J11_22010 | Not Available | Positive | 4496006 - 4496749 | 26387.3 |
| nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | D9J11_22015 | Not Available | Positive | 4496761 - 4497840 | 37058.4 |
| l,d-transpeptidase | D9J11_22020 | Not Available | Positive | 4497902 - 4498837 | 34494.4 |
| Trna-asn | Not Available | Not Available | Positive | 4498894 - 4498969 | Not Available |
| nitrogen assimilation transcriptional regulator | D9J11_22030 | Not Available | Positive | 4499295 - 4500212 | 32825.0 |
| hth-type transcriptional regulator cbl | D9J11_22035 | Not Available | Positive | 4500314 - 4501264 | 35899.1 |
| Trna-asn | Not Available | Not Available | Positive | 4501302 - 4501377 | Not Available |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





