Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CVM N17EC1228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1328414 bp
Thymine Count
1313561 bp
Guanine Count
1338976 bp
Cytosine Count
1354881 bp
Genome Length
5346416 bp
Protein-coding Genes
4828 genes
Non-Coding Genes
457 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| site-specific integrase | D9J11_21810 | Not Available | Negative | 4454181 - 4455355 | 44438.2 |
| site-specific integrase | D9J11_21815 | Not Available | Negative | 4455342 - 4456682 | 51340.3 |
| serine/threonine protein kinase | D9J11_21820 | Not Available | Negative | 4456984 - 4458306 | 49278.6 |
| transcriptional regulator | D9J11_21825 | Not Available | Negative | 4458306 - 4458572 | 10016.9 |
| autotransporter outer membrane beta-barrel domain-containing protein | D9J11_21830 | Not Available | Negative | 4458795 - 4460195 | 50541.7 |
| autoinducer-2 kinase | D9J11_21840 | Not Available | Negative | 4464746 - 4466338 | 57548.0 |
| lsrr family transcriptional regulator | D9J11_21845 | Not Available | Negative | 4466417 - 4467370 | 33799.0 |
| autoinducer 2 import atp-binding protein lsra | D9J11_21850 | Not Available | Positive | 4467619 - 4469154 | 55824.8 |
| autoinducer 2 import system permease lsrc | D9J11_21855 | Not Available | Positive | 4469148 - 4470176 | 36397.1 |
| autoinducer 2 import system permease lsrd | D9J11_21860 | Not Available | Positive | 4470176 - 4471168 | 34458.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





