Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CVM N17EC1228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1328414 bp
Thymine Count
1313561 bp
Guanine Count
1338976 bp
Cytosine Count
1354881 bp
Genome Length
5346416 bp
Protein-coding Genes
4828 genes
Non-Coding Genes
457 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sam-dependent methyltransferase | D9J11_21355 | Not Available | Negative | 4371934 - 4372656 | 27245.7 |
| hydroxyacylglutathione hydrolase | D9J11_21360 | Not Available | Positive | 4372690 - 4373445 | 28435.9 |
| lytic transglycosylase | D9J11_21365 | Not Available | Positive | 4373517 - 4374875 | 49420.3 |
| sam-dependent methyltransferase | D9J11_21370 | Not Available | Negative | 4374923 - 4375546 | 22992.4 |
| endonuclease/exonuclease/phosphatase family protein | D9J11_21375 | Not Available | Negative | 4375550 - 4376350 | 29993.4 |
| lysr family transcriptional regulator | D9J11_21380 | Not Available | Positive | 4376591 - 4377505 | 33777.8 |
| 2,5-diketo-d-gluconic acid reductase b | D9J11_21385 | Not Available | Negative | 4377502 - 4378305 | 29438.4 |
| Trna-asp | Not Available | Not Available | Positive | 4378468 - 4378544 | Not Available |
| oxidoreductase | D9J11_21395 | Not Available | Negative | 4378701 - 4379738 | 38726.0 |
| n-acetyltransferase | D9J11_21400 | Not Available | Positive | 4380071 - 4380559 | 18861.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





