Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CVM N17EC1228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1328414 bp
Thymine Count
1313561 bp
Guanine Count
1338976 bp
Cytosine Count
1354881 bp
Genome Length
5346416 bp
Protein-coding Genes
4828 genes
Non-Coding Genes
457 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yhch/yjgk/yial family protein | D9J11_21125 | Not Available | Positive | 4320150 - 4320617 | 17533.0 |
| 2,3-diketo-l-gulonate trap transporter permease | D9J11_21130 | Not Available | Positive | 4320735 - 4321208 | 17516.9 |
| 2,3-diketo-l-gulonate transporter large permease yian | D9J11_21135 | Not Available | Positive | 4321211 - 4322488 | 45383.1 |
| 2,3-diketo-l-gulonate abc transporter substrate-binding protein | D9J11_21140 | Not Available | Positive | 4322501 - 4323487 | 35972.1 |
| carbohydrate kinase | D9J11_21145 | Not Available | Positive | 4323491 - 4324987 | 55314.3 |
| 3-keto-l-gulonate-6-phosphate decarboxylase ulad | D9J11_21150 | Not Available | Positive | 4324984 - 4325646 | 23534.2 |
| l-ribulose-5-phosphate 3-epimerase | D9J11_21155 | Not Available | Positive | 4325639 - 4326499 | 32513.0 |
| l-ribulose-5-phosphate 4-epimerase | D9J11_21160 | Not Available | Positive | 4326493 - 4327188 | 25577.3 |
| mipa/ompv family protein | D9J11_21170 | Not Available | Negative | 4327535 - 4328275 | 27356.8 |
| lysr family transcriptional regulator | D9J11_21175 | Not Available | Positive | 4328399 - 4329373 | 37276.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





