Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CVM N17EC1228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1328414 bp
Thymine Count
1313561 bp
Guanine Count
1338976 bp
Cytosine Count
1354881 bp
Genome Length
5346416 bp
Protein-coding Genes
4828 genes
Non-Coding Genes
457 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system baseplate subunit tssk | D9J11_20970 | Not Available | Positive | 4278537 - 4279886 | 50440.3 |
| dotu family type iv/vi secretion system protein | D9J11_20975 | Not Available | Positive | 4279883 - 4280572 | 26013.4 |
| ompa family protein | D9J11_20980 | Not Available | Positive | 4280572 - 4282251 | 61806.0 |
| hcp family type vi secretion system effector | D9J11_20985 | Not Available | Positive | 4282257 - 4282748 | 18710.0 |
| type vi secretion system atpase tssh | D9J11_20990 | Not Available | Positive | 4282918 - 4285596 | 98647.0 |
| type vi secretion system tip protein vgrg | D9J11_20995 | Not Available | Positive | 4285581 - 4287938 | 87134.5 |
| hypothetical protein | D9J11_21000 | Not Available | Positive | 4287954 - 4290182 | 84423.5 |
| hypothetical protein | D9J11_21005 | Not Available | Positive | 4290179 - 4290622 | 16525.1 |
| paar domain-containing protein | D9J11_21010 | Not Available | Positive | 4291393 - 4291656 | 8946.9 |
| hypothetical protein | D9J11_21015 | Not Available | Positive | 4291659 - 4292867 | 44429.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





