Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CVM N17EC1228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1328414 bp
Thymine Count
1313561 bp
Guanine Count
1338976 bp
Cytosine Count
1354881 bp
Genome Length
5346416 bp
Protein-coding Genes
4828 genes
Non-Coding Genes
457 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D9J11_20915 | Not Available | Positive | 4271711 - 4271905 | 7606.64 |
| inovirus gp2 family protein | D9J11_20920 | Not Available | Positive | 4271949 - 4272680 | 27636.1 |
| hypothetical protein | D9J11_20925 | Not Available | Positive | 4273039 - 4273599 | 21519.7 |
| alpa family transcriptional regulator | D9J11_20930 | Not Available | Positive | 4273668 - 4273898 | 8955.65 |
| hypothetical protein | D9J11_20935 | Not Available | Positive | 4273936 - 4274166 | 8188.23 |
| hypothetical protein | D9J11_20940 | Not Available | Positive | 4274166 - 4274666 | 18818.7 |
| dna-binding protein | D9J11_20945 | Not Available | Positive | 4274755 - 4275378 | 23983.8 |
| hypothetical protein | D9J11_20950 | Not Available | Positive | 4275475 - 4275708 | 8868.08 |
| duf4222 domain-containing protein | D9J11_20955 | Not Available | Negative | 4275761 - 4275952 | 7397.88 |
| type vi secretion system contractile sheath large subunit | D9J11_20965 | Not Available | Positive | 4276977 - 4278521 | 57784.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





