Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CVM N17EC1228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1328414 bp
Thymine Count
1313561 bp
Guanine Count
1338976 bp
Cytosine Count
1354881 bp
Genome Length
5346416 bp
Protein-coding Genes
4828 genes
Non-Coding Genes
457 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D9J11_20190 | Not Available | Positive | 4122476 - 4124128 | 62803.1 |
| transporter | D9J11_20240 | Not Available | Negative | 4132284 - 4133969 | 60355.1 |
| hypothetical protein | D9J11_20245 | Not Available | Positive | 4134239 - 4134616 | 14204.0 |
| grxa family glutaredoxin | D9J11_20250 | Not Available | Negative | 4134646 - 4134903 | 9695.39 |
| duf1418 family protein | D9J11_20255 | Not Available | Positive | 4135063 - 4135350 | 10521.4 |
| nitroreductase nfsa | D9J11_20260 | Not Available | Positive | 4135334 - 4136056 | 26880.2 |
| 30s ribosomal protein s6--l-glutamate ligase | D9J11_20265 | Not Available | Positive | 4136117 - 4137019 | 32438.5 |
| ybjn domain-containing protein | D9J11_20270 | Not Available | Positive | 4137107 - 4137583 | 17667.1 |
| spermidine/putrescine abc transporter substrate-binding protein potf | D9J11_20275 | Not Available | Positive | 4137934 - 4139046 | 40827.7 |
| putrescine transport atp-binding protein potg | D9J11_20280 | Not Available | Positive | 4139141 - 4140274 | 41933.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





