Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CVM N17EC1228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1328414 bp
Thymine Count
1313561 bp
Guanine Count
1338976 bp
Cytosine Count
1354881 bp
Genome Length
5346416 bp
Protein-coding Genes
4828 genes
Non-Coding Genes
457 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1414 domain-containing protein | D9J11_19630 | Not Available | Positive | 4010160 - 4010387 | 8288.95 |
| duf3413 domain-containing protein | D9J11_19635 | Not Available | Positive | 4010407 - 4012167 | 67299.8 |
| Trna-pro | Not Available | Not Available | Positive | 4012242 - 4012318 | Not Available |
| autotransporter outer membrane beta-barrel domain-containing protein | D9J11_19645 | Not Available | Negative | 4012420 - 4015011 | 91234.1 |
| nitrate/nitrite response regulator protein narp | D9J11_19650 | Not Available | Positive | 4015331 - 4015978 | 23636.5 |
| cytochrome c-type biogenesis protein ccmh | D9J11_19655 | Not Available | Negative | 4016013 - 4017065 | 39178.4 |
| thiol:disulfide interchange protein | D9J11_19660 | Not Available | Negative | 4017062 - 4017619 | 20810.1 |
| cytochrome c-type biogenesis protein ccmf | D9J11_19665 | Not Available | Negative | 4017616 - 4019559 | 71393.6 |
| cytochrome c-type biogenesis protein ccme | D9J11_19670 | Not Available | Negative | 4019556 - 4020035 | 17699.4 |
| heme exporter protein d | D9J11_19675 | Not Available | Negative | 4020032 - 4020241 | 7745.59 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





