Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CVM N17EC1228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1328414 bp
Thymine Count
1313561 bp
Guanine Count
1338976 bp
Cytosine Count
1354881 bp
Genome Length
5346416 bp
Protein-coding Genes
4828 genes
Non-Coding Genes
457 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D9J11_18070 | Not Available | Positive | 3692343 - 3692825 | 18720.5 |
| hypothetical protein | D9J11_18075 | Not Available | Negative | 3692858 - 3692938 | 3203.84 |
| hypothetical protein | D9J11_18080 | Not Available | Negative | 3692974 - 3693399 | 16286.5 |
| hypothetical protein | D9J11_18085 | Not Available | Negative | 3693539 - 3693775 | 9241.41 |
| hypothetical protein | D9J11_18090 | Not Available | Positive | 3693829 - 3694275 | 16836.4 |
| cesd/sycd/lcrh family type iii secretion system chaperone | D9J11_18095 | Not Available | Positive | 3694541 - 3695032 | 19033.1 |
| transcriptional regulator | D9J11_18100 | Not Available | Positive | 3695367 - 3696743 | 52755.8 |
| hypothetical protein | D9J11_18105 | Not Available | Positive | 3696911 - 3697129 | 8045.19 |
| luxr family transcriptional regulator | D9J11_18115 | Not Available | Negative | 3697732 - 3698364 | 23443.7 |
| hypothetical protein | D9J11_18120 | Not Available | Negative | 3698584 - 3698793 | 8151.46 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





