Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CVM N17EC1228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1328414 bp
Thymine Count
1313561 bp
Guanine Count
1338976 bp
Cytosine Count
1354881 bp
Genome Length
5346416 bp
Protein-coding Genes
4828 genes
Non-Coding Genes
457 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diaminopimelate decarboxylase | D9J11_18020 | Not Available | Negative | 3680676 - 3681938 | 46180.0 |
| lysr family transcriptional regulator | D9J11_18025 | Not Available | Positive | 3682060 - 3682995 | 34352.6 |
| aspartate/glutamate racemase | D9J11_18030 | Not Available | Negative | 3682982 - 3683674 | 25309.5 |
| arabinose-proton symporter | D9J11_18035 | Not Available | Negative | 3683803 - 3685221 | 51701.7 |
| 2-dehydro-3-deoxy-d-gluconate 5-dehydrogenase | D9J11_18040 | Not Available | Negative | 3685536 - 3686297 | 27071.6 |
| 5-keto-4-deoxyuronate isomerase | D9J11_18045 | Not Available | Negative | 3686327 - 3687163 | 31078.1 |
| acetyl-coa c-acetyltransferase | D9J11_18050 | Not Available | Negative | 3687450 - 3688631 | 41007.2 |
| transporter | D9J11_18055 | Not Available | Positive | 3688886 - 3690115 | 45101.9 |
| helix-turn-helix transcriptional regulator | D9J11_18060 | Not Available | Positive | 3690575 - 3691207 | 24387.3 |
| transcriptional regulator | D9J11_18065 | Not Available | Positive | 3691541 - 3692350 | 30852.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





