Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CVM N17EC1228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1328414 bp
Thymine Count
1313561 bp
Guanine Count
1338976 bp
Cytosine Count
1354881 bp
Genome Length
5346416 bp
Protein-coding Genes
4828 genes
Non-Coding Genes
457 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucarate dehydratase | D9J11_17770 | Not Available | Negative | 3621285 - 3622625 | 49143.9 |
| glucarate dehydratase | D9J11_17775 | Not Available | Negative | 3622646 - 3623986 | 48867.3 |
| glucarate transporter | D9J11_17780 | Not Available | Negative | 3623988 - 3625340 | 49145.0 |
| flavodoxin | D9J11_17785 | Not Available | Negative | 3625775 - 3626224 | 16275.1 |
| trna pseudouridine(65) synthase truc | D9J11_17790 | Not Available | Negative | 3626242 - 3627024 | 29667.5 |
| yqcc family protein | D9J11_17795 | Not Available | Negative | 3627024 - 3627353 | 12787.2 |
| protein syd | D9J11_17800 | Not Available | Negative | 3627975 - 3628520 | 20709.6 |
| nadph-dependent 7-cyano-7-deazaguanine reductase quef | D9J11_17805 | Not Available | Positive | 3628588 - 3629436 | 32589.3 |
| log family protein ygdh | D9J11_17810 | Not Available | Positive | 3629548 - 3630912 | 50975.0 |
| serine transporter | D9J11_17815 | Not Available | Positive | 3631469 - 3632758 | 46909.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





