Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CVM N17EC1228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1328414 bp
Thymine Count
1313561 bp
Guanine Count
1338976 bp
Cytosine Count
1354881 bp
Genome Length
5346416 bp
Protein-coding Genes
4828 genes
Non-Coding Genes
457 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D9J11_17615 | Not Available | Positive | 3585936 - 3586460 | 20086.9 |
| hypothetical protein | D9J11_17625 | Not Available | Positive | 3586633 - 3587226 | 21863.3 |
| type ii toxin-antitoxin system yafo family toxin | D9J11_17630 | Not Available | Positive | 3587236 - 3587616 | 14554.2 |
| phage portal protein | D9J11_17635 | Not Available | Negative | 3588160 - 3589206 | 39300.1 |
| terminase | D9J11_17640 | Not Available | Negative | 3589206 - 3590009 | 30267.8 |
| phosphoadenosine phosphosulfate reductase | D9J11_17645 | Not Available | Negative | 3590208 - 3590942 | 27976.4 |
| assimilatory sulfite reductase (nadph) hemoprotein subunit | D9J11_17650 | Not Available | Negative | 3591016 - 3592728 | 63963.8 |
| assimilatory sulfite reductase (nadph) flavoprotein subunit | D9J11_17655 | Not Available | Negative | 3592728 - 3594527 | 66255.3 |
| 6-carboxytetrahydropterin synthase qued | D9J11_17660 | Not Available | Positive | 3594843 - 3595208 | 13773.6 |
| fad-dependent oxidoreductase | D9J11_17665 | Not Available | Positive | 3595286 - 3596557 | 46296.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





