Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CVM N17EC1228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1328414 bp
Thymine Count
1313561 bp
Guanine Count
1338976 bp
Cytosine Count
1354881 bp
Genome Length
5346416 bp
Protein-coding Genes
4828 genes
Non-Coding Genes
457 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| anaerobic ribonucleoside-triphosphate reductase | D9J11_17460 | Not Available | Positive | 3561708 - 3563846 | 79999.9 |
| anaerobic ribonucleoside-triphosphate reductase-activating protein | D9J11_17465 | Not Available | Positive | 3564006 - 3564470 | 17490.9 |
| cytochrome b562 | D9J11_17470 | Not Available | Negative | 3564515 - 3564901 | 14034.7 |
| metalloprotease pmba | D9J11_17475 | Not Available | Negative | 3564956 - 3566308 | 48370.4 |
| ribosome-associated protein | D9J11_17480 | Not Available | Positive | 3566402 - 3566953 | 21360.5 |
| udp-n-acetylmuramate:l-alanyl-gamma-d-glutamyl- meso-diaminopimelate ligase | D9J11_17485 | Not Available | Negative | 3567036 - 3568409 | 49881.0 |
| fructose 1,6-bisphosphatase | D9J11_17490 | Not Available | Positive | 3568585 - 3569583 | 36836.0 |
| sugar abc transporter permease yjff | D9J11_17495 | Not Available | Negative | 3569616 - 3570611 | 35008.0 |
| abc transporter permease | D9J11_17500 | Not Available | Negative | 3570598 - 3571620 | 35514.1 |
| sugar abc transporter atp-binding protein | D9J11_17505 | Not Available | Negative | 3571634 - 3573136 | 55262.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





