Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CVM N17EC1228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1328414 bp
Thymine Count
1313561 bp
Guanine Count
1338976 bp
Cytosine Count
1354881 bp
Genome Length
5346416 bp
Protein-coding Genes
4828 genes
Non-Coding Genes
457 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1819 family protein | D9J11_17305 | Not Available | Negative | 3529021 - 3529623 | 22559.1 |
| hypothetical protein | D9J11_17310 | Not Available | Positive | 3529920 - 3530918 | 38835.4 |
| hnh endonuclease | D9J11_17315 | Not Available | Negative | 3531029 - 3531361 | 12544.1 |
| duf4102 domain-containing protein | D9J11_17320 | Not Available | Negative | 3531581 - 3532846 | 48185.0 |
| Trna-leu | Not Available | Not Available | Positive | 3533033 - 3533117 | Not Available |
| aldehyde reductase ahr | D9J11_17330 | Not Available | Positive | 3533313 - 3534332 | 36475.9 |
| duf853 domain-containing protein | D9J11_17335 | Not Available | Positive | 3534462 - 3535964 | 54363.6 |
| lps export abc transporter permease lptg | D9J11_17340 | Not Available | Negative | 3536083 - 3537165 | 39621.0 |
| lps export abc transporter permease lptf | D9J11_17345 | Not Available | Negative | 3537165 - 3538265 | 40360.1 |
| cytosol aminopeptidase | D9J11_17350 | Not Available | Positive | 3538532 - 3540043 | 54883.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





