Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CVM N17EC1228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1328414 bp
Thymine Count
1313561 bp
Guanine Count
1338976 bp
Cytosine Count
1354881 bp
Genome Length
5346416 bp
Protein-coding Genes
4828 genes
Non-Coding Genes
457 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | D9J11_17055 | Not Available | Positive | 3477548 - 3478015 | 17342.1 |
| penicillin-binding protein 2 | D9J11_17060 | Not Available | Positive | 3478046 - 3479947 | 70860.6 |
| rod shape-determining protein roda | D9J11_17065 | Not Available | Positive | 3479950 - 3481062 | 40478.6 |
| endolytic peptidoglycan transglycosylase rlpa | D9J11_17070 | Not Available | Positive | 3481073 - 3482161 | 37502.0 |
| d-alanyl-d-alanine carboxypeptidase | D9J11_17075 | Not Available | Positive | 3482300 - 3483511 | 44446.5 |
| duf493 family protein | D9J11_17080 | Not Available | Positive | 3483622 - 3483885 | 9827.92 |
| octanoyltransferase | D9J11_17085 | Not Available | Positive | 3483986 - 3484627 | 23884.0 |
| dna-binding transcriptional regulator | D9J11_17090 | Not Available | Positive | 3484886 - 3485839 | 35962.5 |
| lipoyl synthase | D9J11_17095 | Not Available | Positive | 3486048 - 3487013 | 36073.8 |
| twin-arginine translocase subunit tata | D9J11_17100 | Not Available | Negative | 3487114 - 3487317 | 7024.71 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





