Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CVM N17EC1228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1328414 bp
Thymine Count
1313561 bp
Guanine Count
1338976 bp
Cytosine Count
1354881 bp
Genome Length
5346416 bp
Protein-coding Genes
4828 genes
Non-Coding Genes
457 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| proline--trna ligase | D9J11_16955 | Not Available | Negative | 3458853 - 3460571 | 63626.2 |
| trna (n6-threonylcarbamoyladenosine(37)-n6)-methyltransferase trmo | D9J11_16960 | Not Available | Negative | 3460682 - 3461389 | 26363.8 |
| rcs stress response system protein rcsf | D9J11_16965 | Not Available | Negative | 3461386 - 3461790 | 14164.3 |
| methionine abc transporter substrate-binding protein metq | D9J11_16970 | Not Available | Negative | 3461908 - 3462723 | 29433.3 |
| methionine abc transporter | D9J11_16975 | Not Available | Negative | 3462763 - 3463416 | 23257.6 |
| methionine import atp-binding protein metn | D9J11_16980 | Not Available | Negative | 3463409 - 3464440 | 37804.7 |
| d-glycero-beta-d-manno-heptose 1,7-bisphosphate 7-phosphatase | D9J11_16985 | Not Available | Positive | 3464628 - 3465200 | 21139.2 |
| j domain-containing protein | D9J11_16990 | Not Available | Negative | 3465410 - 3466050 | 24849.2 |
| duf1266 domain-containing protein | D9J11_16995 | Not Available | Negative | 3466047 - 3466754 | 26963.8 |
| sel1 repeat family protein | D9J11_17000 | Not Available | Positive | 3466856 - 3467410 | 20885.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





