Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CVM N17EC1228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1328414 bp
Thymine Count
1313561 bp
Guanine Count
1338976 bp
Cytosine Count
1354881 bp
Genome Length
5346416 bp
Protein-coding Genes
4828 genes
Non-Coding Genes
457 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D9J11_16755 | Not Available | Positive | 3418374 - 3418439 | 2329.94 |
| iron-sulfur cluster insertion protein erpa | D9J11_16760 | Not Available | Positive | 3418432 - 3418776 | 12101.2 |
| tric cation channel family protein | D9J11_16765 | Not Available | Negative | 3418823 - 3419446 | 22129.1 |
| cobalamin-binding protein | D9J11_16770 | Not Available | Negative | 3419484 - 3420284 | 29368.4 |
| 5'-methylthioadenosine/s-adenosylhomocysteine nucleosidase | D9J11_16775 | Not Available | Negative | 3420277 - 3420975 | 24355.4 |
| dgtpase | D9J11_16780 | Not Available | Positive | 3421059 - 3422576 | 59384.2 |
| periplasmic serine endoprotease degp | D9J11_16785 | Not Available | Positive | 3422706 - 3424130 | 49357.3 |
| cdar family transcriptional regulator | D9J11_16790 | Not Available | Positive | 3424285 - 3425442 | 43660.1 |
| duf3461 family protein | D9J11_16795 | Not Available | Negative | 3425531 - 3425917 | 15097.0 |
| hypothetical protein | D9J11_16800 | Not Available | Positive | 3425963 - 3426160 | 7766.62 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





