Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CVM N17EC1228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1328414 bp
Thymine Count
1313561 bp
Guanine Count
1338976 bp
Cytosine Count
1354881 bp
Genome Length
5346416 bp
Protein-coding Genes
4828 genes
Non-Coding Genes
457 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna/rna nuclease sfsa | D9J11_16705 | Not Available | Negative | 3402610 - 3403314 | 26230.2 |
| rna 2',3'-cyclic phosphodiesterase | D9J11_16710 | Not Available | Negative | 3403329 - 3403859 | 19943.1 |
| atp-dependent helicase hrpb | D9J11_16715 | Not Available | Positive | 3403933 - 3406362 | 89147.2 |
| bifunctional glycosyl transferase/transpeptidase | D9J11_16720 | Not Available | Positive | 3406558 - 3409086 | 94071.7 |
| ferrichrome porin fhua | D9J11_16725 | Not Available | Positive | 3409306 - 3411549 | 82198.5 |
| iron(3+)-hydroxamate import atp-binding protein fhuc | D9J11_16730 | Not Available | Positive | 3411600 - 3412397 | 28888.2 |
| fe(3+)-hydroxamate abc transporter substrate-binding protein fhud | D9J11_16735 | Not Available | Positive | 3412397 - 3413287 | 33067.3 |
| fe(3+)-hydroxamate abc transporter permease fhub | D9J11_16740 | Not Available | Positive | 3413284 - 3415266 | 70411.6 |
| glutamate-1-semialdehyde 2,1-aminomutase | D9J11_16745 | Not Available | Negative | 3415424 - 3416704 | 45342.7 |
| clc family h(+)/cl(-) exchange transporter | D9J11_16750 | Not Available | Positive | 3416929 - 3418350 | 50351.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





