Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CVM N17EC1228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1328414 bp
Thymine Count
1313561 bp
Guanine Count
1338976 bp
Cytosine Count
1354881 bp
Genome Length
5346416 bp
Protein-coding Genes
4828 genes
Non-Coding Genes
457 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5-oxoprolinase subunit pxpb | D9J11_16650 | Not Available | Negative | 3392565 - 3393221 | 23948.0 |
| nif3-like dinuclear metal center hexameric protein | D9J11_16655 | Not Available | Negative | 3393244 - 3393987 | 26894.0 |
| mfs transporter | D9J11_16660 | Not Available | Positive | 3394258 - 3395739 | 54178.1 |
| deoxyribodipyrimidine photo-lyase | D9J11_16665 | Not Available | Negative | 3395889 - 3397307 | 53676.9 |
| duf1722 domain-containing protein | D9J11_16670 | Not Available | Negative | 3397304 - 3397813 | 20232.3 |
| isas1 family transposase | D9J11_16680 | Not Available | Negative | 3398853 - 3398957 | 3726.6 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | D9J11_16685 | Not Available | Negative | 3399081 - 3399560 | 17936.6 |
| polynucleotide adenylyltransferase pcnb | D9J11_16690 | Not Available | Negative | 3399557 - 3400975 | 54673.1 |
| trna glutamyl-q(34) synthetase gluqrs | D9J11_16695 | Not Available | Negative | 3401014 - 3401940 | 34894.5 |
| rna polymerase-binding transcription factor dksa | D9J11_16700 | Not Available | Negative | 3401977 - 3402432 | 17528.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





