Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CVM N17EC1228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1328414 bp
Thymine Count
1313561 bp
Guanine Count
1338976 bp
Cytosine Count
1354881 bp
Genome Length
5346416 bp
Protein-coding Genes
4828 genes
Non-Coding Genes
457 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yicc family protein | D9J11_16245 | Not Available | Positive | 3307150 - 3308013 | 33160.9 |
| dna damage-inducible protein d | D9J11_16250 | Not Available | Positive | 3308235 - 3309059 | 31033.0 |
| trimeric intracellular cation channel family protein | D9J11_16255 | Not Available | Positive | 3309351 - 3309968 | 21989.8 |
| nad-dependent dna ligase ligb | D9J11_16260 | Not Available | Negative | 3309965 - 3311647 | 63361.0 |
| guanylate kinase | D9J11_16265 | Not Available | Positive | 3311905 - 3312528 | 23594.1 |
| dna-directed rna polymerase subunit omega | D9J11_16270 | Not Available | Positive | 3312583 - 3312858 | 10237.2 |
| bifunctional (p)ppgpp synthetase ii/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | D9J11_16275 | Not Available | Positive | 3312877 - 3314985 | 79347.1 |
| trna (guanosine(18)-2'-o)-methyltransferase trmh | D9J11_16280 | Not Available | Positive | 3314992 - 3315681 | 25344.6 |
| atp-dependent dna helicase recg | D9J11_16285 | Not Available | Positive | 3315687 - 3317768 | 76421.1 |
| sodium/glutamate symport carrier protein | D9J11_16290 | Not Available | Negative | 3317937 - 3319142 | 42427.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





