Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CVM N17EC1228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1328414 bp
Thymine Count
1313561 bp
Guanine Count
1338976 bp
Cytosine Count
1354881 bp
Genome Length
5346416 bp
Protein-coding Genes
4828 genes
Non-Coding Genes
457 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipopolysaccharide heptosyltransferase rfac | D9J11_16145 | Not Available | Positive | 3289426 - 3290418 | 36795.2 |
| o-antigen ligase rfal | D9J11_16150 | Not Available | Positive | 3290415 - 3291623 | 46073.7 |
| lipopolysaccharide n-acetylglucosaminyltransferase | D9J11_16155 | Not Available | Negative | 3291659 - 3292801 | 43569.1 |
| glycosyltransferase family 8 protein | D9J11_16160 | Not Available | Negative | 3292810 - 3293823 | 40156.9 |
| lipopolysaccharide core heptose(ii) kinase rfay | D9J11_16165 | Not Available | Negative | 3293848 - 3294555 | 27507.8 |
| lipopolysaccharide 3-alpha-galactosyltransferase | D9J11_16170 | Not Available | Negative | 3294581 - 3295588 | 39338.7 |
| lipopolysaccharide core heptose(i) kinase rfap | D9J11_16175 | Not Available | Negative | 3295631 - 3296428 | 31027.1 |
| glycosyltransferase family 1 protein | D9J11_16180 | Not Available | Negative | 3296421 - 3297545 | 42544.7 |
| lipopolysaccharide core heptosyltransferase rfaq | D9J11_16185 | Not Available | Negative | 3297542 - 3298600 | 39448.9 |
| 3-deoxy-d-manno-octulosonic acid transferase | D9J11_16190 | Not Available | Positive | 3299013 - 3300290 | 47293.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





