Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CVM N17EC1228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1328414 bp
Thymine Count
1313561 bp
Guanine Count
1338976 bp
Cytosine Count
1354881 bp
Genome Length
5346416 bp
Protein-coding Genes
4828 genes
Non-Coding Genes
457 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D9J11_14990 | Not Available | Negative | 3065189 - 3065407 | 8320.36 |
| transcription termination factor rho | D9J11_14995 | Not Available | Negative | 3065417 - 3066676 | 47007.1 |
| rho operon leader peptide rhol | D9J11_15000 | Not Available | Negative | 3066761 - 3066862 | 3750.4 |
| thiol reductase thioredoxin | D9J11_15005 | Not Available | Negative | 3067003 - 3067332 | 11807.2 |
| atp-dependent rna helicase rhlb | D9J11_15010 | Not Available | Positive | 3067463 - 3068728 | 47128.7 |
| guanosine-5'-triphosphate,3'-diphosphate diphosphatase | D9J11_15015 | Not Available | Positive | 3068862 - 3070346 | 54908.5 |
| atp-dependent dna helicase rep | D9J11_15020 | Not Available | Negative | 3070393 - 3072414 | 77059.6 |
| peptidyl-prolyl cis-trans isomerase | D9J11_15030 | Not Available | Positive | 3073278 - 3073559 | 10232.6 |
| ketol-acid reductoisomerase | D9J11_15035 | Not Available | Negative | 3073646 - 3075121 | 54102.2 |
| transcriptional regulator | D9J11_15040 | Not Available | Positive | 3075271 - 3076164 | 33206.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





