Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CVM N17EC1228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1328414 bp
Thymine Count
1313561 bp
Guanine Count
1338976 bp
Cytosine Count
1354881 bp
Genome Length
5346416 bp
Protein-coding Genes
4828 genes
Non-Coding Genes
457 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yeca family protein | D9J11_14365 | Not Available | Negative | 2952844 - 2953509 | 25040.5 |
| Trna-leu | Not Available | Not Available | Positive | 2953705 - 2953791 | Not Available |
| Trna-cys | Not Available | Not Available | Positive | 2953804 - 2953877 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 2953932 - 2954007 | Not Available |
| cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | D9J11_14385 | Not Available | Negative | 2954159 - 2954707 | 20701.7 |
| excinuclease abc subunit c | D9J11_14390 | Not Available | Negative | 2954764 - 2956596 | 68192.0 |
| dna-binding response regulator | D9J11_14395 | Not Available | Negative | 2956593 - 2957249 | 23894.1 |
| hypothetical protein | D9J11_14400 | Not Available | Positive | 2957545 - 2957721 | 6737.43 |
| duf2594 family protein | D9J11_14405 | Not Available | Positive | 2957708 - 2957932 | 8239.04 |
| transcriptional regulator sdia | D9J11_14410 | Not Available | Negative | 2957999 - 2958721 | 28060.8 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





