Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CVM N17EC1228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1328414 bp
Thymine Count
1313561 bp
Guanine Count
1338976 bp
Cytosine Count
1354881 bp
Genome Length
5346416 bp
Protein-coding Genes
4828 genes
Non-Coding Genes
457 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| txe/yoeb family addiction module toxin | D9J11_13985 | Not Available | Positive | 2887019 - 2887273 | 10216.1 |
| sdr family oxidoreductase | D9J11_13990 | Not Available | Positive | 2887356 - 2888180 | 29709.8 |
| lysr family transcriptional regulator | D9J11_13995 | Not Available | Positive | 2888226 - 2889155 | 34171.0 |
| membrane protein yoei | D9J11_14000 | Not Available | Positive | 2889370 - 2889432 | 2241.66 |
| low-affinity putrescine importer plap | D9J11_14005 | Not Available | Positive | 2889422 - 2890780 | 49540.5 |
| yeee/yede family protein | D9J11_14010 | Not Available | Positive | 2890959 - 2892017 | 38042.6 |
| hypothetical protein | D9J11_14015 | Not Available | Positive | 2892031 - 2892258 | 8092.61 |
| exodeoxyribonuclease i | D9J11_14020 | Not Available | Negative | 2892301 - 2893728 | 54461.6 |
| serine-type d-ala-d-ala carboxypeptidase dacd | D9J11_14025 | Not Available | Positive | 2893937 - 2895103 | 43375.6 |
| dna gyrase inhibitor sbmc | D9J11_14030 | Not Available | Positive | 2895222 - 2895695 | 18076.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





