Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CVM N17EC1228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1328414 bp
Thymine Count
1313561 bp
Guanine Count
1338976 bp
Cytosine Count
1354881 bp
Genome Length
5346416 bp
Protein-coding Genes
4828 genes
Non-Coding Genes
457 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rhamnosyltransferase | D9J11_13880 | Not Available | Positive | 2869013 - 2869903 | 33783.4 |
| dtdp-rhamnosyl transferase rfbg | D9J11_13885 | Not Available | Positive | 2869932 - 2870801 | 33762.4 |
| o13/o129/o135 family o-antigen polymerase | D9J11_13890 | Not Available | Positive | 2870822 - 2871970 | 43752.4 |
| gtra family protein | D9J11_13895 | Not Available | Positive | 2871974 - 2872348 | 14093.5 |
| duf2029 domain-containing protein | D9J11_13905 | Not Available | Positive | 2873366 - 2874778 | 53345.6 |
| hypothetical protein | D9J11_13910 | Not Available | Positive | 2874775 - 2875134 | 13782.5 |
| nadp-dependent phosphogluconate dehydrogenase | D9J11_13915 | Not Available | Positive | 2875217 - 2876623 | 51460.1 |
| udp-glucose 6-dehydrogenase | D9J11_13920 | Not Available | Positive | 2876872 - 2878038 | 43590.2 |
| lps o-antigen chain length determinant protein wzzb | D9J11_13925 | Not Available | Positive | 2878185 - 2879162 | 36243.6 |
| hypothetical protein | D9J11_13930 | Not Available | Negative | 2879071 - 2879262 | 6673.01 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





