Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CVM N17EC1228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1328414 bp
Thymine Count
1313561 bp
Guanine Count
1338976 bp
Cytosine Count
1354881 bp
Genome Length
5346416 bp
Protein-coding Genes
4828 genes
Non-Coding Genes
457 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trap transporter substrate-binding protein | D9J11_13325 | Not Available | Positive | 2758710 - 2759681 | 35998.6 |
| 50s ribosomal protein l9 | D9J11_13330 | Not Available | Negative | 2759793 - 2760242 | 15770.0 |
| 30s ribosomal protein s18 | D9J11_13335 | Not Available | Negative | 2760284 - 2760511 | 8986.94 |
| primosomal replication protein n | D9J11_13340 | Not Available | Negative | 2760516 - 2760830 | 11472.9 |
| 30s ribosomal protein s6 | D9J11_13345 | Not Available | Negative | 2760837 - 2761232 | 15173.8 |
| duf1471 domain-containing protein | D9J11_13350 | Not Available | Positive | 2761560 - 2761835 | 10149.9 |
| l-ribulose-5-phosphate 4-epimerase ulaf | D9J11_13355 | Not Available | Negative | 2761964 - 2762650 | 25309.2 |
| l-ribulose-5-phosphate 3-epimerase ulae | D9J11_13360 | Not Available | Negative | 2762650 - 2763504 | 32050.4 |
| 3-keto-l-gulonate-6-phosphate decarboxylase ulad | D9J11_13365 | Not Available | Negative | 2763514 - 2764164 | 23650.4 |
| ascorbate-specific phosphotransferase enzyme iia component | D9J11_13370 | Not Available | Negative | 2764178 - 2764642 | 17226.5 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





