Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CVM N17EC1228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1328414 bp
Thymine Count
1313561 bp
Guanine Count
1338976 bp
Cytosine Count
1354881 bp
Genome Length
5346416 bp
Protein-coding Genes
4828 genes
Non-Coding Genes
457 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D9J11_13170 | Not Available | Positive | 2728634 - 2728894 | 9676.38 |
| iron-sulfur cluster assembly scaffold protein sufa | D9J11_13180 | Not Available | Positive | 2729291 - 2729917 | 22840.7 |
| type ii toxin-antitoxin system yafo family toxin | D9J11_13185 | Not Available | Positive | 2729917 - 2730297 | 14736.4 |
| membrane protein insertion efficiency factor yidd | D9J11_13190 | Not Available | Negative | 2730356 - 2730589 | 9066.13 |
| duf4177 domain-containing protein | D9J11_13195 | Not Available | Negative | 2730582 - 2730824 | 8941.63 |
| gamma-glutamylcyclotransferase ytfp | D9J11_13200 | Not Available | Negative | 2730999 - 2731340 | 12867.2 |
| autotransporter assembly complex protein tamb | D9J11_13205 | Not Available | Negative | 2731343 - 2735122 | 136735.0 |
| autotransporter assembly complex protein tama | D9J11_13210 | Not Available | Negative | 2735119 - 2736852 | 64839.8 |
| peptide-methionine (s)-s-oxide reductase | D9J11_13215 | Not Available | Positive | 2737058 - 2737696 | 23316.3 |
| hlyc/corc family transporter | D9J11_13220 | Not Available | Positive | 2738019 - 2739362 | 49765.6 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





