Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CVM N17EC1228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1328414 bp
Thymine Count
1313561 bp
Guanine Count
1338976 bp
Cytosine Count
1354881 bp
Genome Length
5346416 bp
Protein-coding Genes
4828 genes
Non-Coding Genes
457 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucose-1-phosphate adenylyltransferase | D9J11_13120 | Not Available | Negative | 2716076 - 2717371 | 48700.4 |
| glycogen debranching protein glgx | D9J11_13125 | Not Available | Negative | 2717389 - 2719362 | 73608.6 |
| glycogen-branching enzyme | D9J11_13130 | Not Available | Negative | 2719359 - 2721545 | 84341.4 |
| aspartate-semialdehyde dehydrogenase | D9J11_13135 | Not Available | Negative | 2721818 - 2722921 | 40020.2 |
| naat family transporter yhgn | D9J11_13140 | Not Available | Positive | 2723113 - 2723706 | 21491.9 |
| low-affinity gluconate transporter | D9J11_13145 | Not Available | Negative | 2723763 - 2725103 | 46418.9 |
| gluconokinase | D9J11_13150 | Not Available | Negative | 2725107 - 2725634 | 19544.4 |
| gntr family transcriptional regulator | D9J11_13155 | Not Available | Negative | 2725773 - 2726768 | 36424.3 |
| pirin family protein | D9J11_13160 | Not Available | Negative | 2726992 - 2727524 | 19960.5 |
| phage late control d family protein | D9J11_13165 | Not Available | Positive | 2727525 - 2728591 | 39535.7 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





