Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CVM N17EC1228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1328414 bp
Thymine Count
1313561 bp
Guanine Count
1338976 bp
Cytosine Count
1354881 bp
Genome Length
5346416 bp
Protein-coding Genes
4828 genes
Non-Coding Genes
457 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative adenosine monophosphate-protein transferase fic | D9J11_12765 | Not Available | Negative | 2635814 - 2636416 | 22942.3 |
| duf2559 family protein | D9J11_12770 | Not Available | Negative | 2636406 - 2636573 | 6668.12 |
| peptidylprolyl isomerase a | D9J11_12775 | Not Available | Negative | 2636678 - 2637250 | 20432.5 |
| mfs transporter | D9J11_12780 | Not Available | Positive | 2637521 - 2638702 | 43169.0 |
| nitrite reductase large subunit | D9J11_12785 | Not Available | Positive | 2638964 - 2641507 | 93126.7 |
| nitrite reductase small subunit | D9J11_12790 | Not Available | Positive | 2641504 - 2641830 | 12284.7 |
| nitrite transporter nirc | D9J11_12795 | Not Available | Positive | 2641956 - 2642762 | 28564.1 |
| uroporphyrinogen-iii c-methyltransferase | D9J11_12800 | Not Available | Positive | 2642781 - 2644154 | 49970.5 |
| duf4223 domain-containing protein | D9J11_12805 | Not Available | Positive | 2644401 - 2644568 | 5819.16 |
| amino acid permease | D9J11_12810 | Not Available | Positive | 2644812 - 2646200 | 49375.4 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





