Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CVM N17EC1228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1328414 bp
Thymine Count
1313561 bp
Guanine Count
1338976 bp
Cytosine Count
1354881 bp
Genome Length
5346416 bp
Protein-coding Genes
4828 genes
Non-Coding Genes
457 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | D9J11_12250 | Not Available | Positive | 2530956 - 2532164 | 41855.1 |
| had family hydrolase | D9J11_12255 | Not Available | Positive | 2532164 - 2532979 | 30207.9 |
| hypothetical protein | D9J11_12260 | Not Available | Positive | 2533065 - 2533349 | 9971.24 |
| multidrug transporter mdfa | D9J11_12265 | Not Available | Negative | 2533390 - 2534622 | 44323.7 |
| undecaprenyl-diphosphatase | D9J11_12270 | Not Available | Positive | 2534907 - 2535503 | 22399.9 |
| deor family transcriptional regulator | D9J11_12275 | Not Available | Positive | 2535561 - 2536319 | 28549.5 |
| d-alanyl-d-alanine carboxypeptidase | D9J11_12280 | Not Available | Negative | 2536366 - 2537568 | 43611.3 |
| glutathione s-transferase | D9J11_12285 | Not Available | Positive | 2537815 - 2538441 | 23714.4 |
| pqq-dependent sugar dehydrogenase | D9J11_12290 | Not Available | Negative | 2538438 - 2539553 | 41101.8 |
| biofilm formation regulator bssr | D9J11_12295 | Not Available | Negative | 2539664 - 2540047 | 14522.5 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





