Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CVM N17EC1228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1328414 bp
Thymine Count
1313561 bp
Guanine Count
1338976 bp
Cytosine Count
1354881 bp
Genome Length
5346416 bp
Protein-coding Genes
4828 genes
Non-Coding Genes
457 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glsb/yeaq/ymge family stress response membrane protein | D9J11_10185 | Not Available | Negative | 2121849 - 2122103 | 8717.3 |
| flagellar brake protein | D9J11_10190 | Not Available | Positive | 2122304 - 2123038 | 27957.9 |
| murein transglycosylase | D9J11_10195 | Not Available | Negative | 2123040 - 2123651 | 22227.8 |
| murein tetrapeptide carboxypeptidase | D9J11_10200 | Not Available | Positive | 2123751 - 2124665 | 33569.5 |
| k+/h+ antiporter nhap2 | D9J11_10205 | Not Available | Positive | 2124760 - 2126496 | 62289.2 |
| hypothetical protein | D9J11_10210 | Not Available | Negative | 2126630 - 2126812 | 6918.3 |
| is3 family transposase | D9J11_10215 | Not Available | Positive | 2126811 - 2128156 | 52060.2 |
| alanine racemase catabolic | D9J11_10220 | Not Available | Negative | 2128305 - 2129375 | 38846.9 |
| d-amino acid dehydrogenase small subunit | D9J11_10225 | Not Available | Negative | 2129385 - 2130683 | 47610.1 |
| spovr family protein | D9J11_10230 | Not Available | Positive | 2131013 - 2132545 | 60817.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





