Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CVM N17EC1228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1328414 bp
Thymine Count
1313561 bp
Guanine Count
1338976 bp
Cytosine Count
1354881 bp
Genome Length
5346416 bp
Protein-coding Genes
4828 genes
Non-Coding Genes
457 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase-associated protein rapa | D9J11_09980 | Not Available | Positive | 2072958 - 2075864 | 109747.0 |
| bifunctional trna pseudouridine(32) synthase/ribosomal large subunit pseudouridine synthase rlua | D9J11_09985 | Not Available | Positive | 2075876 - 2076535 | 24862.1 |
| molecular chaperone djla | D9J11_09990 | Not Available | Negative | 2076652 - 2077467 | 30581.2 |
| lps-assembly protein lptd | D9J11_09995 | Not Available | Positive | 2077722 - 2080076 | 89675.8 |
| chaperone sura | D9J11_10000 | Not Available | Positive | 2080129 - 2081415 | 47286.5 |
| 4-hydroxythreonine-4-phosphate dehydrogenase | D9J11_10005 | Not Available | Positive | 2081415 - 2082404 | 35210.9 |
| ribosomal rna small subunit methyltransferase a | D9J11_10010 | Not Available | Positive | 2082401 - 2083222 | 30422.0 |
| co2+/mg2+ efflux protein apag | D9J11_10015 | Not Available | Positive | 2083225 - 2083602 | 13867.6 |
| diadenosine tetraphosphatase | D9J11_10020 | Not Available | Positive | 2083609 - 2084451 | 31298.4 |
| type 3 dihydrofolate reductase | D9J11_10025 | Not Available | Negative | 2084529 - 2085008 | 18000.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





