Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CVM N17EC1228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1328414 bp
Thymine Count
1313561 bp
Guanine Count
1338976 bp
Cytosine Count
1354881 bp
Genome Length
5346416 bp
Protein-coding Genes
4828 genes
Non-Coding Genes
457 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase 3 membrane subunit | D9J11_09415 | Not Available | Negative | 1946840 - 1947763 | 33065.4 |
| formate hydrogenlyase subunit 3 | D9J11_09420 | Not Available | Negative | 1947766 - 1949592 | 64113.2 |
| formate hydrogenlyase subunit 2 | D9J11_09425 | Not Available | Negative | 1949589 - 1950200 | 21874.4 |
| formate hydrogenlyase regulatory protein hyca | D9J11_09430 | Not Available | Negative | 1950325 - 1950786 | 17627.9 |
| protein hypa | D9J11_09435 | Not Available | Positive | 1950998 - 1951348 | 13168.9 |
| hydrogenase isoenzymes nickel incorporation protein hypb | D9J11_09440 | Not Available | Positive | 1951352 - 1952224 | 31566.8 |
| hydrogenase assembly protein hypc | D9J11_09445 | Not Available | Positive | 1952215 - 1952487 | 9732.58 |
| hydrogenase formation protein hypd | D9J11_09450 | Not Available | Positive | 1952487 - 1953608 | 41393.7 |
| hydrogenase expression/formation protein hype | D9J11_09455 | Not Available | Positive | 1953605 - 1954615 | 35124.6 |
| formate hydrogenlyase transcriptional activator flha | D9J11_09460 | Not Available | Positive | 1954689 - 1956767 | 78443.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





