Escherichia coli strain CVM N17EC0994

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain CVM N17EC0994 is a Gram-negative bacterium characterized by its rod shape and mobility, facilitated by the presence of flagella. It is a facultative anaerobe, thriving optimally at 37°C within a mesophilic temperature range. This strain is notable for its habitat, primarily associated with various hosts, including Homo sapiens, Gallus gallus, Bos taurus, and numerous other vertebrates and invertebrates. CVM N17EC0994 exhibits a free-living biotic relationship and has a unique genomic structure with a single replicon and a double membrane. The strain has been implicated in a wide array of health effects, particularly in humans, including urinary tract infections (UTIs), gastrointestinal infections, and more severe conditions such as neonatal meningitis and hemolytic uremic syndrome (HUS). It is associated with both foodborne and enteric diseases, indicating its potential role as a pathogen in various clinical and environmental contexts. The diversity of hosts suggests that CVM N17EC0994 may play a significant ecological role, contributing to the health of both its animal hosts and the environment. Its ability to cause infections in multiple species highlights its adaptability and potential impact on public health. Understanding the pathogenic mechanisms of this strain can inform strategies to mitigate its health risks, particularly in food safety and infection control.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain CVM N17EC0994

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain CVM N17EC0994
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain CVM N17EC0994


Gene Summary

Adenine Count

1316298 bp

Thymine Count

1301003 bp

Guanine Count

1328615 bp

Cytosine Count

1355249 bp

Genome Length

5316429 bp

Protein-coding Genes

4921 genes

Non-Coding Genes

363 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glycerate 2-kinaseD9H94_03170Not AvailableNegative673356 - 67450139122.7
2-hydroxy-3-oxopropionate reductaseD9H94_03175Not AvailableNegative674598 - 67548830661.6
5-keto-4-deoxy-d-glucarate aldolaseD9H94_03180Not AvailableNegative675518 - 67628827400.6
galactarate transporterD9H94_03185Not AvailableNegative676304 - 67763849012.0
galactarate dehydrataseD9H94_03190Not AvailablePositive678013 - 67958456474.0
type ii toxin-antitoxin system prlf family antitoxinD9H94_03195Not AvailablePositive679733 - 68006812389.7
type ii toxin-antitoxin system yhav family toxinD9H94_03200Not AvailablePositive680068 - 68053217850.2
deor family transcriptional regulatorD9H94_03205Not AvailableNegative680587 - 68139629574.3
tagatose-bisphosphate aldolase subunit kbazD9H94_03210Not AvailablePositive681645 - 68292547263.1
pts n-acetylgalactosamine transporter subunit iibD9H94_03215Not AvailablePositive682948 - 68342117056.8

Displaying genes 951 – 960 of 5288 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total