Escherichia coli strain CVM N17EC0994

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain CVM N17EC0994 is a Gram-negative bacterium characterized by its rod shape and mobility, facilitated by the presence of flagella. It is a facultative anaerobe, thriving optimally at 37°C within a mesophilic temperature range. This strain is notable for its habitat, primarily associated with various hosts, including Homo sapiens, Gallus gallus, Bos taurus, and numerous other vertebrates and invertebrates. CVM N17EC0994 exhibits a free-living biotic relationship and has a unique genomic structure with a single replicon and a double membrane. The strain has been implicated in a wide array of health effects, particularly in humans, including urinary tract infections (UTIs), gastrointestinal infections, and more severe conditions such as neonatal meningitis and hemolytic uremic syndrome (HUS). It is associated with both foodborne and enteric diseases, indicating its potential role as a pathogen in various clinical and environmental contexts. The diversity of hosts suggests that CVM N17EC0994 may play a significant ecological role, contributing to the health of both its animal hosts and the environment. Its ability to cause infections in multiple species highlights its adaptability and potential impact on public health. Understanding the pathogenic mechanisms of this strain can inform strategies to mitigate its health risks, particularly in food safety and infection control.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain CVM N17EC0994

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain CVM N17EC0994
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain CVM N17EC0994

Gene Summary

Adenine Count

1316298 bp

Thymine Count

1301003 bp

Guanine Count

1328615 bp

Cytosine Count

1355249 bp

Genome Length

5316429 bp

Protein-coding Genes

4921 genes

Non-Coding Genes

363 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
succinate-acetate/proton symporter satpD9H94_13410Not AvailablePositive2773876 - 277444220072.2
molybdopterin adenylyltransferaseD9H94_13415Not AvailableNegative2774477 - 277506421223.6
transaldolase 1D9H94_13420Not AvailableNegative2775179 - 277613235221.2
peroxide stress protein yaaaD9H94_13430Not AvailablePositive2777912 - 277868829675.6
duf2502 domain-containing proteinD9H94_13435Not AvailableNegative2778841 - 277913711339.5
threonine synthaseD9H94_13440Not AvailableNegative2779351 - 278063747086.4
homoserine kinaseD9H94_13445Not AvailableNegative2780638 - 278157033611.6
bifunctional aspartate kinase/homoserine dehydrogenase iD9H94_13450Not AvailableNegative2781572 - 278403489125.5
thr operon leader peptideD9H94_13455Not AvailableNegative2784115 - 27841802138.61
trna/rrna methyltransferaseD9H94_13460Not AvailableNegative2784394 - 278508025360.7

Displaying genes 2881 – 2890 of 5288 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total