Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain PNUSAE019399 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1396240 bp
Thymine Count
1379401 bp
Guanine Count
1401953 bp
Cytosine Count
1433963 bp
Genome Length
5630312 bp
Protein-coding Genes
5184 genes
Non-Coding Genes
447 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thioredoxin trxc | ED600_RS23730 | Not Available | Negative | 4818066 - 4818485 | 15555.6 |
| trna/rrna methyltransferase | ED600_RS23735 | Not Available | Positive | 4818692 - 4819729 | 37786.5 |
| uracil-dna glycosylase | ED600_RS23740 | Not Available | Negative | 4819777 - 4820466 | 25694.7 |
| autonomous glycyl radical cofactor grca | ED600_RS23745 | Not Available | Positive | 4820771 - 4821154 | 14285.0 |
| cysteine/o-acetylserine transporter | ED600_RS23750 | Not Available | Negative | 4821210 - 4821797 | 21249.5 |
| lysr family transcriptional regulator | ED600_RS23755 | Not Available | Positive | 4821900 - 4822781 | 33271.1 |
| leucine-rich repeat domain-containing protein | ED600_RS23760 | Not Available | Positive | 4822905 - 4823057 | 5956.86 |
| nark family nitrate/nitrite mfs transporter | ED600_RS23765 | Not Available | Positive | 4823381 - 4824769 | 49884.1 |
| nitrate reductase subunit alpha | ED600_RS23770 | Not Available | Positive | 4824851 - 4828591 | 140204.0 |
| nitrate reductase subunit beta | ED600_RS23775 | Not Available | Positive | 4828588 - 4830132 | 58548.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





