Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain PNUSAE019399 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1396240 bp
Thymine Count
1379401 bp
Guanine Count
1401953 bp
Cytosine Count
1433963 bp
Genome Length
5630312 bp
Protein-coding Genes
5184 genes
Non-Coding Genes
447 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-phosphoshikimate 1-carboxyvinyltransferase | ED600_RS20000 | Not Available | Negative | 4050339 - 4051622 | 46098.5 |
| 3-phosphoserine/phosphohydroxythreonine transaminase | ED600_RS20005 | Not Available | Negative | 4051693 - 4052781 | 39842.6 |
| duf421 domain-containing protein | ED600_RS20010 | Not Available | Negative | 4052980 - 4053672 | 26283.6 |
| 30s ribosomal protein s12 methylthiotransferase accessory protein ycao | ED600_RS20015 | Not Available | Positive | 4053802 - 4055562 | 65655.0 |
| atp-dependent chaperone clpb | ED600_RS20020 | Not Available | Negative | 4056066 - 4058639 | 95590.8 |
| polyphenol oxidase | ED600_RS20025 | Not Available | Negative | 4058769 - 4059500 | 26383.4 |
| 23s rrna pseudouridine(1911/1915/1917) synthase rlud | ED600_RS20030 | Not Available | Negative | 4059497 - 4060477 | 37125.0 |
| outer membrane protein assembly factor bamd | ED600_RS20035 | Not Available | Positive | 4060612 - 4061349 | 27830.9 |
| ribosome-associated translation inhibitor raia | ED600_RS20040 | Not Available | Positive | 4061620 - 4061961 | 12785.3 |
| hypothetical protein | ED600_RS20045 | Not Available | Positive | 4062065 - 4062112 | 1912.35 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





