Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain PNUSAE019399 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1396240 bp
Thymine Count
1379401 bp
Guanine Count
1401953 bp
Cytosine Count
1433963 bp
Genome Length
5630312 bp
Protein-coding Genes
5184 genes
Non-Coding Genes
447 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | ED600_RS19540 | Not Available | Negative | 3952427 - 3953572 | 42311.4 |
| type ii toxin-antitoxin system antitoxin hicb | ED600_RS19550 | Not Available | Negative | 3955301 - 3955717 | 15247.5 |
| type ii toxin-antitoxin system mrna interferase toxin hica | ED600_RS19555 | Not Available | Negative | 3955763 - 3955939 | 6782.3 |
| yncj family protein | ED600_RS19560 | Not Available | Positive | 3956161 - 3956391 | 8709.32 |
| 23s rrna 5-hydroxycytidine c2501 synthase | ED600_RS19565 | Not Available | Negative | 3956483 - 3958444 | 72786.0 |
| helix-turn-helix domain-containing protein | ED600_RS19570 | Not Available | Negative | 3958517 - 3959053 | 19732.4 |
| bene family transporter ydco | ED600_RS19575 | Not Available | Positive | 3959106 - 3960320 | 42147.8 |
| is200/is605 family element transposase accessory protein tnpb | ED600_RS19580 | Not Available | Negative | 3960360 - 3961568 | 45716.0 |
| duf3313 domain-containing protein | ED600_RS19590 | Not Available | Negative | 3962095 - 3962763 | 24428.3 |
| tellurite resistance methyltransferase tehb | ED600_RS19595 | Not Available | Negative | 3963066 - 3963659 | 22532.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





