Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain PNUSAE019399 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1396240 bp
Thymine Count
1379401 bp
Guanine Count
1401953 bp
Cytosine Count
1433963 bp
Genome Length
5630312 bp
Protein-coding Genes
5184 genes
Non-Coding Genes
447 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| jab domain-containing protein | ED600_RS18190 | Not Available | Positive | 3704410 - 3705078 | 25259.9 |
| 50s ribosomal protein l28 | ED600_RS18195 | Not Available | Positive | 3705295 - 3705531 | 9007.02 |
| 50s ribosomal protein l33 | ED600_RS18200 | Not Available | Positive | 3705552 - 3705719 | 6371.94 |
| bifunctional dna-formamidopyrimidine glycosylase/dna-(apurinic or apyrimidinic site) lyase | ED600_RS18205 | Not Available | Positive | 3705817 - 3706626 | 30261.8 |
| pantetheine-phosphate adenylyltransferase | ED600_RS18210 | Not Available | Negative | 3706665 - 3707144 | 17837.7 |
| 3-deoxy-d-manno-octulosonic acid transferase | ED600_RS18215 | Not Available | Negative | 3707152 - 3708429 | 47363.0 |
| lipopolysaccharide core heptosyltransferase rfaq | ED600_RS18220 | Not Available | Positive | 3708842 - 3709900 | 39434.8 |
| glycosyltransferase family 4 protein | ED600_RS18225 | Not Available | Positive | 3709897 - 3711021 | 42477.6 |
| lipopolysaccharide core heptose(i) kinase rfap | ED600_RS18230 | Not Available | Positive | 3711014 - 3711811 | 31027.1 |
| lipopolysaccharide 1,3-galactosyltransferase | ED600_RS18235 | Not Available | Positive | 3711854 - 3712022 | 6426.65 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





